TAP Sir2 in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SIR2

(Domain names are clickable)



List of proteins (42)

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namename additionClick button to show/hide sequence: Download sequence?
c0_seq10_10_rccomp10552_c0_seq10_10 [925 - 311] (REVERSE SENSE) len=1712 path=[1:0-355 357:356-456 458:457-583 5843:584-585 587:586-882 4744:883-997 884:998-1161 1048:1162-1208 4376:1209-1347 4515:1348-1373 1095:1374-1711]
c0_seq11_7_rccomp10552_c0_seq11_7 [1416 - 673] (REVERSE SENSE) len=1673 path=[1:0-355 357:356-456 5809:457-671 458:672-798 5843:799-800 587:801-1097 884:1098-1261 1048:1262-1308 4515:1309-1334 1095:1335-1672]
c0_seq12_8_rccomp10552_c0_seq12_8 [1042 - 311] (REVERSE SENSE) len=1664 path=[1:0-355 3442:356-472 357:473-573 458:574-700 5843:701-702 587:703-999 4744:1000-1114 884:1115-1278 1048:1279-1325 1095:1326-1663]
c0_seq13_6_rccomp10552_c0_seq13_6 [1623 - 673] (REVERSE SENSE) len=1647 path=[1:0-355 357:356-456 5809:457-671 458:672-798 5843:799-800 587:801-1097 884:1098-1261 1048:1262-1308 1095:1309-1646]
c0_seq14_4_rccomp10552_c0_seq14_4 [1380 - 790] (REVERSE SENSE) len=1602 path=[1:0-355 3442:356-472 357:473-573 5809:574-788 458:789-915 5843:916-917 587:918-1214 884:1215-1378 4881:1379-1554 1048:1555-1601]
c0_seq15_5_rccomp10552_c0_seq15_5 [1140 - 673] (REVERSE SENSE) len=1600 path=[1:0-355 357:356-456 5809:457-671 458:672-798 5843:799-800 587:801-1097 4744:1098-1212 884:1213-1376 4881:1377-1552 1048:1553-1599]
c0_seq16_8_rccomp10552_c0_seq16_8 [1219 - 311] (REVERSE SENSE) len=1597 path=[1:0-355 357:356-456 458:457-583 5843:584-585 587:586-882 884:883-1046 1048:1047-1093 4376:1094-1232 4515:1233-1258 1095:1259-1596]
c0_seq17_4_rccomp10552_c0_seq17_4 [1551 - 790] (REVERSE SENSE) len=1591 path=[1:0-355 3442:356-472 357:473-573 5809:574-788 458:789-915 5843:916-917 587:918-1214 884:1215-1378 1048:1379-1425 4376:1426-1564 4515:1565-1590]
c0_seq18_6_rccomp10552_c0_seq18_6 [1140 - 673] (REVERSE SENSE) len=1589 path=[1:0-355 357:356-456 5809:457-671 458:672-798 5843:799-800 587:801-1097 4744:1098-1212 884:1213-1376 1048:1377-1423 4376:1424-1562 4515:1563-1588]
c0_seq19_7_rccomp10552_c0_seq19_7 [1318 - 311] (REVERSE SENSE) len=1575 path=[1:0-355 3442:356-472 357:473-573 458:574-700 5843:701-702 587:703-999 884:1000-1163 1048:1164-1210 4515:1211-1236 1095:1237-1574]
c0_seq1_8_rccomp10552_c0_seq1_8 [1263 - 673] (REVERSE SENSE) len=1988 path=[1:0-355 357:356-456 5809:457-671 458:672-798 5843:799-800 587:801-1097 884:1098-1261 4881:1262-1437 1048:1438-1484 4376:1485-1623 4515:1624-1649 1095:1650-1987]
c0_seq20_9_rccomp10552_c0_seq20_9 [925 - 311] (REVERSE SENSE) len=1573 path=[1:0-355 357:356-456 458:457-583 5843:584-585 587:586-882 4744:883-997 884:998-1161 1048:1162-1208 4515:1209-1234 1095:1235-1572]
c0_seq21_6_rccomp10552_c0_seq21_6 [1257 - 790] (REVERSE SENSE) len=1567 path=[1:0-355 3442:356-472 357:473-573 5809:574-788 458:789-915 5843:916-917 587:918-1214 4744:1215-1329 884:1330-1493 1048:1494-1540 4515:1541-1566]
c0_seq22_4_rccomp10552_c0_seq22_4 [1165 - 311] (REVERSE SENSE) len=1552 path=[1:0-355 3442:356-472 357:473-573 458:574-700 5843:701-702 587:703-999 884:1000-1163 4881:1164-1339 1048:1340-1386 4376:1387-1525 4515:1526-1551]
c0_seq23_6_rccomp10552_c0_seq23_6 [1525 - 311] (REVERSE SENSE) len=1549 path=[1:0-355 3442:356-472 357:473-573 458:574-700 5843:701-702 587:703-999 884:1000-1163 1048:1164-1210 1095:1211-1548]
c0_seq24_8_rccomp10552_c0_seq24_8 [925 - 311] (REVERSE SENSE) len=1547 path=[1:0-355 357:356-456 458:457-583 5843:584-585 587:586-882 4744:883-997 884:998-1161 1048:1162-1208 1095:1209-1546]
c0_seq25_5_rccomp10552_c0_seq25_5 [1042 - 311] (REVERSE SENSE) len=1502 path=[1:0-355 3442:356-472 357:473-573 458:574-700 5843:701-702 587:703-999 4744:1000-1114 884:1115-1278 4881:1279-1454 1048:1455-1501]
c0_seq26_6_rccomp10552_c0_seq26_6 [1042 - 311] (REVERSE SENSE) len=1491 path=[1:0-355 3442:356-472 357:473-573 458:574-700 5843:701-702 587:703-999 4744:1000-1114 884:1115-1278 1048:1279-1325 4376:1326-1464 4515:1465-1490]
c0_seq27_7_rccomp10552_c0_seq27_7 [1201 - 311] (REVERSE SENSE) len=1458 path=[1:0-355 357:356-456 458:457-583 5843:584-585 587:586-882 884:883-1046 1048:1047-1093 4515:1094-1119 1095:1120-1457]
c0_seq28_4_rccomp10552_c0_seq28_4 [1452 - 790] (REVERSE SENSE) len=1452 path=[1:0-355 3442:356-472 357:473-573 5809:574-788 458:789-915 5843:916-917 587:918-1214 884:1215-1378 1048:1379-1425 4515:1426-1451]
c0_seq29_6_rccomp10552_c0_seq29_6 [1140 - 673] (REVERSE SENSE) len=1450 path=[1:0-355 357:356-456 5809:457-671 458:672-798 5843:799-800 587:801-1097 4744:1098-1212 884:1213-1376 1048:1377-1423 4515:1424-1449]
c0_seq2_9_rccomp10552_c0_seq2_9 [925 - 311] (REVERSE SENSE) len=1888 path=[1:0-355 357:356-456 458:457-583 5843:584-585 587:586-882 4744:883-997 884:998-1161 4881:1162-1337 1048:1338-1384 4376:1385-1523 4515:1524-1549 1095:1550-1887]
c0_seq30_6_rccomp10552_c0_seq30_6 [1408 - 311] (REVERSE SENSE) len=1432 path=[1:0-355 357:356-456 458:457-583 5843:584-585 587:586-882 884:883-1046 1048:1047-1093 1095:1094-1431]
c0_seq31_6_rccomp10552_c0_seq31_6 [1042 - 311] (REVERSE SENSE) len=1352 path=[1:0-355 3442:356-472 357:473-573 458:574-700 5843:701-702 587:703-999 4744:1000-1114 884:1115-1278 1048:1279-1325 4515:1326-1351]
c0_seq32_5_rccomp10552_c0_seq32_5 [1006 - 455] (REVERSE SENSE) len=1030 path=[5301:0-66 5843:67-68 587:69-365 4744:366-480 884:481-644 1048:645-691 1095:692-1029]
c0_seq34_5_rccomp10552_c0_seq34_5 [891 - 58] (REVERSE SENSE) len=915 path=[5301:0-66 5843:67-68 587:69-365 884:366-529 1048:530-576 1095:577-914]
c0_seq38_3_rccomp10552_c0_seq38_3 [531 - 58] (REVERSE SENSE) len=753 path=[5301:0-66 5843:67-68 587:69-365 884:366-529 4881:530-705 1048:706-752]
c0_seq3_6_rccomp10552_c0_seq3_6 [1855 - 1304] (REVERSE SENSE) len=1879 path=[1:0-355 3442:356-472 357:473-573 5809:574-788 458:789-915 5843:916-917 587:918-1214 4744:1215-1329 884:1330-1493 1048:1494-1540 1095:1541-1878]
c0_seq41_3_rccomp10552_c0_seq41_3 [603 - 58] (REVERSE SENSE) len=603 path=[5301:0-66 5843:67-68 587:69-365 884:366-529 1048:530-576 4515:577-602]
c0_seq4_8_rccomp10552_c0_seq4_8 [1434 - 673] (REVERSE SENSE) len=1812 path=[1:0-355 357:356-456 5809:457-671 458:672-798 5843:799-800 587:801-1097 884:1098-1261 1048:1262-1308 4376:1309-1447 4515:1448-1473 1095:1474-1811]
c0_seq5_8_rccomp10552_c0_seq5_8 [1048 - 311] (REVERSE SENSE) len=1773 path=[1:0-355 357:356-456 458:457-583 5843:584-585 587:586-882 884:883-1046 4881:1047-1222 1048:1223-1269 4376:1270-1408 4515:1409-1434 1095:1435-1772]
c0_seq6_6_rccomp10552_c0_seq6_6 [1740 - 790] (REVERSE SENSE) len=1764 path=[1:0-355 3442:356-472 357:473-573 5809:574-788 458:789-915 5843:916-917 587:918-1214 884:1215-1378 1048:1379-1425 1095:1426-1763]
c0_seq7_6_rccomp10552_c0_seq7_6 [1738 - 1187] (REVERSE SENSE) len=1762 path=[1:0-355 357:356-456 5809:457-671 458:672-798 5843:799-800 587:801-1097 4744:1098-1212 884:1213-1376 1048:1377-1423 1095:1424-1761]
c0_seq8_5_rccomp10552_c0_seq8_5 [1257 - 790] (REVERSE SENSE) len=1717 path=[1:0-355 3442:356-472 357:473-573 5809:574-788 458:789-915 5843:916-917 587:918-1214 4744:1215-1329 884:1330-1493 4881:1494-1669 1048:1670-1716]
c0_seq9_8_rccomp10552_c0_seq9_8 [1336 - 311] (REVERSE SENSE) len=1714 path=[1:0-355 3442:356-472 357:473-573 458:574-700 5843:701-702 587:703-999 884:1000-1163 1048:1164-1210 4376:1211-1349 4515:1350-1375 1095:1376-1713]
c0_seq1_1[2 - 889] len=889 path=[1:0-449 451:450-496 498:497-888]
c0_seq1_7_rccomp9111_c0_seq1_7 [1747 - 293] (REVERSE SENSE) len=2132 path=[1:0-348 5168:349-349 350:350-398 399:399-435 5224:436-440 441:441-1049 1050:1050-1389 4432:1390-1726 1390:1727-2131]
c0_seq2_5_rccomp9111_c0_seq2_5 [1684 - 293] (REVERSE SENSE) len=1795 path=[1:0-348 5168:349-349 350:350-398 399:399-435 5224:436-440 441:441-1049 1050:1050-1389 1390:1390-1794]
c0_seq3_7_rccomp9111_c0_seq3_7 [1408 - 89] (REVERSE SENSE) len=1793 path=[3897:0-96 5224:97-101 441:102-710 1050:711-1050 4432:1051-1387 1390:1388-1792]
c0_seq4_5_rccomp9111_c0_seq4_5 [1345 - 89] (REVERSE SENSE) len=1456 path=[3897:0-96 5224:97-101 441:102-710 1050:711-1050 1390:1051-1455]
c0_seq5_6_rccomp9111_c0_seq5_6 [857 - 99] (REVERSE SENSE) len=1242 path=[4251:0-159 1050:160-499 4432:500-836 1390:837-1241]
c0_seq6_4_rccomp9111_c0_seq6_4 [794 - 99] (REVERSE SENSE) len=905 path=[4251:0-159 1050:160-499 1390:500-904]
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum